July 18, 2025
Yi Xing, PhD, Appointed Associate Chief Scientific Officer for Omics, Technology & Engineering

May 7, 2021
Yi Xing, PhD, Named Executive Director of DBHi

Mar 9, 2021
Researchers Identify RNA Editing Events that Impact Gene Expression & Phenotype

Jan 15, 2021
Researchers Develop Long-read-based Strategy for circRNA Analysis

Feb 21, 2020
New Computational Tools Identify Alternative Splicing Changes in Aggressive Cancers

Apr 05, 2019
CHOP Team Develops Computational Model to Predict Effects of Alternative Splicing

Nov 13, 2018
Scientist Opens CHOP’s New Center for Computational and Genomic Medicine

Tweets by YiXing77

Wang Y*, Xie Z*, Kutschera E, Adams JI, Kadash-Edmondson KE, Xing Y. (2024) rMATS-turbo: an efficient and flexible computational tool for alternative splicing analysis of large-scale RNA-seq data. Nature Protocols, 19:1083-1104. (*joint first authors)

Wang F*, Xu Y*, Wang R*, Zhang B, Smith N, Notaro A, Gaerlan S, Kutschera E, Kadash-Edmondson KE, Xing Y⁺, Lin L⁺. (2023) TEQUILA-seq: A versatile and low-cost method for targeted long-read RNA sequencing. Nature Communications, 14:4760. (⁺joint corresponding authors; *joint first authors)

Pan Y*, Phillips JW*, Zhang BD*, Noguchi M*, Kutschera E, McLaughlin J, Nesterenko PA, Mao Z, Bangayan NJ, Wang R, Tran W, Yang HT, Wang Y, Xu Y, Obusan MB, Cheng D, Lee AH, Kadash-Edmondson KE, Champhekar A, Puig-Saus C, Ribas A, Prins RM, Seet CS, Crooks GM, Witte ON⁺, Xing Y⁺. (2023) IRIS: Discovery of cancer immunotherapy targets arising from pre-mRNA alternative splicing. PNAS, 120(21):e2221116120. (⁺joint corresponding authors; *joint first authors)

Gao Y*⁺, Wang F*, Wang R*, Kutschera E, Xu Y, Xie S, Wang Y, Kadash-Edmondson KE, Lin L, and Xing Y⁺. (2023) ESPRESSO: Robust discovery and quantification of transcript isoforms from error-prone long-read RNA-seq data. Science Advances, 9(3):eabq507. (⁺joint corresponding authors; *joint first authors)

Xin R*, Gao Y*, Gao Y, Wang R, Kadash-Edmondson KE, Liu B, Wang Y, Lin L, Xing Y. (2021) isoCirc catalogs full-length circular RNA isoforms in human transcriptomes. Nature Communications, 12:266. (*joint first authors)

The Xing Lab is located on the 9th floor of the Colket Translational Research Building.

The Children’s Hospital of Philadelphia
9054 Colket Translational Research Bldg.
3501 Civic Center Blvd.
Philadelphia, PA 19104
(215) 590-0280